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CRISPR4ALL

CRISPR4ALL

Phenotypic CRISPR screens are instrumental many fundamental biological phenomena, and arrayed CRISPR libraries extend the screening territory to cell-nonautonomous, biochemical and morphological phenotypes. We have recently completed the generation of two human genome wide arrayed plasmid libraries termed “T.spiezzo” (gene ablation, 19,936 plasmids) and “T.gonfio” (gene activation and epigenetic silencing, 22,442 plasmids). The libraries and the related methodologies are described in our bioRxiv paper . These tools allow for the individual manipulation of every human gene, are broadly applicable to all human biology, and are attracting strong interest from biological and medical researchers worldwide. However, while these plasmid collections are suitable to studying immortalized transfectable cell lines, their most transformative utilization involves primary human cells and human induced pluripotent stem cells, which require that plasmid libraries be repackaged into lentiviral vectors. With CRISPR4ALL we enable the access of the global research community to these toolsets and to the research data generated therefrom by 1) generating lentiviruses from our library plasmids and providing them to the research community; 2) by providing practical training, protocols and standards to interested users, and 3) by creating a community of users adopting robust FAIR-compliant computational tools for collaborative research and data sharing.

Call for proposals

How can you have access to the resources? Submit a one-page proposal stating how you intend to use the CRISPR libraries. The selected proposals will obtain on-site training in the Aguzzi laboratory if the interested parties are not experienced with genomic screens or obtain delivery of the libraries if they are familiar with genomic screens. Financial aid to cover, at least partially, the costs of reagents, training, and stipends to partially cover living expenses are available in the Aguzzi lab through funding by Swissuniversities (CHORD Track B, 2022 call).

In your one-page proposals,  address the following points:

  • Title
  • Background rationale
  • Planned experiments
  • Extent of screen
    • Pooled/arrayed
    • Genome-wide
    • Subgenomic (specify extent)
  • Required resources from CRISPR4ALL
    • Plasmids
    • Lentiviral vectors
    • Analyses (specify which)
    • Residency in the Aguzzi lab (elaborate)

Proposal submission: Artemi Bendandi, PhD artemi.bendandi@uzh.ch

The proposals will be evaluated by a Scientific Advisory Board with the following members: Prof. Martin Jinek, Prof. Gerald Schwank, Prof. Jacob Corn.